Generally, such services are callable by Cytoscape or directly by non-Cytoscape clients (e.g., Python) in the larger bioinformatics community. Note that some Cytoscape functions rely on code deployed as services available on web servers. Related repositoriesĪll build scripts are moved to the following repository: However, for the initial repository clones and builds, we recommend that you follow the command line-based procedure below, and then switch to whichever IDE you prefer. ![]() While you can use any IDE to maintain Cytoscape 3, a popular IDE for this is Eclipse, which has its own Maven and Git support, too. ![]()
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